Pannier Lab
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Publications

  1. Kasputis T, Pieper A, Rodenhausen KB, Schmidt D, Sekora D, Rice C, Franke-Schubert E, Schubert M, Pannier AK. 2015. Use of precisely-sculptured thin film (STF) substrates with generalized ellipsometry to determine spatial distribution of adsorbed fibronectin to nanostructured columnar topographies and effect on cell adhesion. Acta Biomater. 18:88-99.

  2. Martin TM, Wysocki BJ, Wysocki TA, Pannier AK. 2015. Identifying intracellular pDNA losses from a model of nonviral gene delivery. IEEE Transactions on NanoBioscience. Epub ahead of print.

  3. Martin TM, Plautz SA, Pannier AK. 2015. Temporal endogenous gene expression profiles in response to lipid-mediated transfection. J Gene Med. 17(1-2):14-32.

  4. Martin TM, Plautz SA, Pannier AK. 2015. Temporal endogenous gene expression profiles in response to polymer-mediated transfection and profile comparison to lipid-mediated transfection. J Gene Med. 17(1-2):33-53.

  5. Koenig M, Kasputis T, Schmidt D, Rodenhausen KB, Eichhorn KJ, Pannier AK, Schubert M, Stamm M, Uhlmann P. 2014. Combined QCM-D/GE as a tool to characterize stimuli-responsive swelling of and protein adsorption on polymer brushes grafted onto 3D-nanostructures. Anal Bioanal Chem. 406(28):7233-42.

  6. Wysocki BJ, Martin TM, Wysocki TA, Pannier AK. 2014. Simulation supported estimation of end-to-end transmission parameters in non-viral gene delivery. IEEE International Conference on Communication. 4179–4183.

  7. Sargus-Patino CN, Wright EC, Plautz SA, Miles JR, Vallet JL, Pannier AK.  2013.  In vitro development of pre-implantation porcine embryos using alginate hydrogels as a three-dimensional matrix. Reprod Fertil Dev. 26(7):943-953.

  8. Martin TM, Wysocki BJ, Beyersdorf JP, Wysocki TA, Pannier AK. 2014. Integrating mitosis, toxicity, and transgene expression in a telecommunications packet-switched network model of lipoplex-mediated gene delivery. Biotechnology and Bioengineering. 111(8):1659-1671.

  9. Kasputis T, Pieper A, Schubert M, Pannier AK. 2014. Dynamic Analysis of DNA Nanoparticle Immobilization to Model Biomaterial Substrates using Combinatorial Spectroscopic Ellipsometry and Quartz Crystal Microbalance with Dissipation. Thin solid films: ICSE-VI Proceedings. 571(3):637-643.

  10. Martin TM, Plautz SA and Pannier AK. 2013. Network analysis of endogenous gene expression profiles after polyethyleneimine-mediated DNA delivery. Journal of Gene Medicine. 15(3-4):142-154.

  11. Wysocki BJ, Wysocki TA, Martin TM and Pannier AK. 2013. Modeling nonviral gene delivery as a macro-to-nano communication system. Nano Communication Networks. 4(1):14-22.

  12. Kasputis T, Koenig M, Schmidt D, Sekora D,  Rodenhausen KB, Eichhorn KJ,  Uhlmann P, Schubert E, Pannier AK, Schubert M, Stamm M. 2013. Slanted columnar thin films prepared by glancing angle deposition functionalized with polyacrylic acid Guiselin polymer brushes. Journal of Physical Chemistry, Part C. 117(27):13971-13980.

  13. Pannier AK, Segura T. 2013. Surface- and hydrogel-mediated delivery of nucleic acid nanoparticles. Methods Mol Biol. 948:149-69.

  14. Kelly AM, Lammers A, Jones DD, Stowell R, Hoy R, Curtis E, Pannier AK. 2013. Implementation of a “rapid design challenge” in a cross-disciplinary senior capstone course and evaluation of device performance. American Society for Engineering Education Conference Proceedings.

  15. Regier MC, Taylor JD, Borcyk T, Yang Y, Pannier AK. 2012. Fabrication and characterization of DNA-loaded zein nanospheres. Journal of Nanobiotechnology. 10(44).

  16. Kasputis T and Pannier AK. 2012. The role of surface chemistry-induced cell characteristics on nonviral gene delivery. Journal of Biological Engineering. 6(1):17.

  17. Othman SF, Curtis ET, Plautz SA, Pannier AK, Butler SD, Xu H. 2012. MR elastography monitoring of tissue-engineered constructs. NMR Biomed. 25(3):452-63.

  18. Rodenhausen KB, Schmidt D, Kasputis T, Pannier AK, Schubert E, and Schubert M. 2012. Generalized ellipsometry in-situ quantification of organic adsorbate attachment within slanted columnar thin films. Optics Express. 20(5): 5419-28.

  19. Sharp AT, Pannier AK, Wysocki BJ, Wysocki TA. 2012. A novel telecommunications-based approach to HIV modeling and simulation.  Nano Communication Networks. 3(2): 129-137.

  20. Plautz SA, Boanca G, Riethoven  J-JM, Pannier AK. 2011. Microarray analysis of gene expression profiles in cells transfected with nonviral vectors. Molecular Therapy. 19(12): 2144-51.

  21. Rodenhausen KB, Kasputis T, Pannier AK, Gerasimov JY, Lai RY, Solinsky M, Tiwald TE, Wang H, Sarkar A, Hofmann T, Ianno N, and Schubert M. 2011. Combined optical and acoustical method for deterination of thickness and porosity of transparent organic layers below the ultra-thin film limit. Review of Scientific Instruments. 82(10): 103111.

  22. Singh D, Pannier AK, Zempleni J. 2011. Identification of holocarboxylase synthetase chromatin binding sites in human mammary cell lines using the DNA adenine methyltransferase identification technology. Anal Biochem. 413(1):55-9.

  23. Bellis AD, Bernabé BP, Weiss MS, Yarrington ME, Barbolina MV, Pannier AK, Jerus JS, Broadbelt LJ, Shea LD. 2010. Cellular arrays for large-scale anaysis of transcription factor activity. Biotechnol Bioeng. 108(2):395-403.

  24. Rodenhausen KB, Duensing BA, Kasputis T, Pannier AK, Hofmann T, Schubert M, Tiwald TE, Solinsky M, and Wagner M. 2011. In-situ monitoring of alkanethiol self-assembled monolayer chemisorption with combined spectroscopic ellipsometry and quartz crystal microbalance techniques Thin solid films. 519(9): 2817-2820.

  25. Pannier AK, Wieland JA, Shea LD.  2008. Surface polyethylene glycol enhances substrate-mediated gene delivery by nonspecifically immobilized complexes. Acta Biomat. 4(1):26-39.

  26. Pannier AK, Ariazi EA, Bellis AD, Bengali Z, Jordan VC, Shea LD.  2007.  Bioluminescence imaging for assessment and normalization in transfected cell arrays.  Biotechnol Bioeng. 98:486-97.

  27. Pannier AK, Anderson BC, Shea LD.  2005.  Substrate-mediated delivery from self-assembled monolayers: effect of surface ionization, hydrophilicity, and patterning.  Acta Biomat. 1(5):511-522.

  28. Bengali, Z., Pannier AK, Segura T, Anderson BC, Jang JH, Mustoe TA, Shea LD.  2005. Gene delivery through cell culture substrate adsorbed DNA complexes. Biotechnol Bioeng. 90(3):290-302.

  29. Pannier AK, Shea LD.  2004. Controlled release systems for DNA delivery.  Mol. Ther. 10(1): 19-26.

  30. Pannier AK, Arora V, Iversen PL, Brand RM. 2004. Transdermal delivery of phosphorodiamidate Morpholino oligomers across hairless mouse skin. Int. J. Pharm. 275(1-2):217-226.

  31. Pannier AK, Shea LD. 2004. Controlled-release systems for non-viral vectors. The Journal of the Robert H. Lurie Comprehensive Cancer Center of Northwestern University. 9:35-29.

  32. Pannier AK, Brand, RM, Jones DD. 2003. Fuzzy modeling of skin permeability coefficients.  Pharm. Res. 20: 143-148.

Book Chapter
  1. Pannier AK and Segura T. 2013. Surface- and Hydrogel-Mediated Delivery of Nucleic Acid Nanoparticles.  In: Ogris M and Oupicky D (eds) Nanotechnology for Nucleic Acid Delivery: Methods in Molecular Biology. 948:149-69.
Patents
  1. Segura, T., Shea, L.D., Pannier, A.K., Bengali. Z., Jang, J.H., Chung, P., and Anderson, B. Controlled surface-associated delivery of genes and oligonucleotides. U.S. Patent No. 7,029,697. April 18, 2006.
  2. Pannier, A.K., Ariazi, E.A., Jordan, V.C., and Shea, L.D.  Cellular arrays.  U.S. Patent Application:  11/809,772.  Filing Date: June 1, 2007.